syntaxin 3  (Alomone Labs)

Journal: PLoS Genetics

Article Title: Loss-of-function of the ciliopathy protein Cc2d2a disorganizes the vesicle fusion machinery at the periciliary membrane and indirectly affects Rab8-trafficking in zebrafish photoreceptors

doi: 10.1371/journal.pgen.1007150

Figure Lengend Snippet: Proteins involved in OCV fusion are affected by loss of Cc2d2a function 4 dpf wild-type (wt) (A-A’) and cc2d2a-/- retinal cryosections (B - B’) and 6 dpf wt (C-C’) and cc2d2a-/- retinal cryosections (D-D’) , all stained for Syntaxin3 (Stx3) (grayscale in A-D and green in A’-D’ ) and counterstained with DiO (A’,B’) or BODIPY (C’,D’) (both magenta) to label membranes. In wt PRs at both developmental times Stx3 localizes along the plasma membrane (arrowhead), between the mitochondrial cluster and the OS and at the synapse (A-A’, C-C’) , similar to SNAP25. While minimal Stx3 mislocalization is visible in cc2d2a -/- at 4dpf, a striking decrease in fluorescence intensity is obvious in the mutant (B, D) . (E) Western blot on whole eye lysates at 6 dpf confirms decreased protein levels of Stx3 in cc2d2a -/-. Protein levels of SNAP25 and the Exocyst component Exoc4 are also decreased in cc2d2a -/- whole eyes. (F) Relative protein content was determined as the ratio of band intensity relative to the housekeeping protein control (beta-actin), averaged for all replicates and repeated in 3 independent blots. Error bars represent standard deviation. * p<0 . 05 , ** p< 0 . 01 , Student’s t-test. Full western blots are shown in .

Article Snippet: Membranes were probed using antibodies against Syntaxin3 (rabbit, 1:2000, Alomone labs, ANR-005), rSec8 (mouse, 1:1000, Enzo, clone 14G1), SNAP25 (rabbit, 1:5000, StressGen Biotechnologies, VAP-SV002), Rab8 (mouse, 1:500, Novus Biologicals, clone 3G1) and β-actin (mouse, 1:1000, Sigma, A1978).

Techniques: Staining, Fluorescence, Mutagenesis, Western Blot, Standard Deviation

Journal: PLoS Genetics

Article Title: Loss-of-function of the ciliopathy protein Cc2d2a disorganizes the vesicle fusion machinery at the periciliary membrane and indirectly affects Rab8-trafficking in zebrafish photoreceptors

doi: 10.1371/journal.pgen.1007150

Figure Lengend Snippet: Proteins involved in OCV fusion are affected by loss of Cc2d2a function 4 dpf wild-type (wt) (A-A’) and cc2d2a-/- retinal cryosections (B - B’) and 6 dpf wt (C-C’) and cc2d2a-/- retinal cryosections (D-D’) , all stained for Syntaxin3 (Stx3) (grayscale in A-D and green in A’-D’ ) and counterstained with DiO (A’,B’) or BODIPY (C’,D’) (both magenta) to label membranes. In wt PRs at both developmental times Stx3 localizes along the plasma membrane (arrowhead), between the mitochondrial cluster and the OS and at the synapse (A-A’, C-C’) , similar to SNAP25. While minimal Stx3 mislocalization is visible in cc2d2a -/- at 4dpf, a striking decrease in fluorescence intensity is obvious in the mutant (B, D) . (E) Western blot on whole eye lysates at 6 dpf confirms decreased protein levels of Stx3 in cc2d2a -/-. Protein levels of SNAP25 and the Exocyst component Exoc4 are also decreased in cc2d2a -/- whole eyes. (F) Relative protein content was determined as the ratio of band intensity relative to the housekeeping protein control (beta-actin), averaged for all replicates and repeated in 3 independent blots. Error bars represent standard deviation. * p<0 . 05 , ** p< 0 . 01 , Student’s t-test. Full western blots are shown in .

Article Snippet: Primary antibodies were rabbit anti-Syntaxin3 (1:400, Alomone labs, ANR-005), rabbit anti-SNAP25 (1:1000, StressGen Biotechnologies, VAP-SV002), mouse monoclonal anti-Rab8a (1:100, Novus Biologicals, clone 3G1), rabbit anti-Cacna1fa (1:5000, a gift from Michael Taylor, University of Wisconsin [ ]), rabbit anti-blue opsin (1:250, gift from David Hyde) and rabbit anti green opsin (1:400, gift from David Hyde, University of Notre Dame).

Techniques: Staining, Fluorescence, Mutagenesis, Western Blot, Standard Deviation